Protein–RNA interactions for Protein: Q9H6H4

REEP4, Receptor expression-enhancing protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP4Q9H6H4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 RN7SL589P-201ENST00000481268 310 ntBASIC15.29■□□□□ 0.04
REEP4Q9H6H4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 AC092902.6-201ENST00000641783 218 ntBASIC15.29■□□□□ 0.04
REEP4Q9H6H4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
REEP4Q9H6H4 AC022532.1-201ENST00000624563 1728 ntBASIC15.29■□□□□ 0.04
REEP4Q9H6H4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 AC126177.1-201ENST00000547829 2218 ntBASIC15.28■□□□□ 0.04
REEP4Q9H6H4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 HYMAI-201ENST00000635591 3347 ntBASIC15.28■□□□□ 0.04
REEP4Q9H6H4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 AC040169.1-201ENST00000565382 521 ntBASIC15.28■□□□□ 0.04
REEP4Q9H6H4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
REEP4Q9H6H4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 TSPY26P-202ENST00000565928 3884 ntBASIC15.27■□□□□ 0.04
REEP4Q9H6H4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 MIR940-201ENST00000401276 94 ntBASIC15.27■□□□□ 0.04
REEP4Q9H6H4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 AC142381.1-201ENST00000426099 345 ntBASIC15.27■□□□□ 0.04
REEP4Q9H6H4 ADH5P3-201ENST00000433842 1137 ntBASIC15.27■□□□□ 0.04
REEP4Q9H6H4 AC243562.2-201ENST00000561247 970 ntBASIC15.27■□□□□ 0.04
REEP4Q9H6H4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.27■□□□□ 0.04
REEP4Q9H6H4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.27■□□□□ 0.03
REEP4Q9H6H4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms