Protein–RNA interactions for Protein: Q9H4Q4

PRDM12, PR domain zinc finger protein 12, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM12Q9H4Q4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 SPDYE17-201ENST00000412399 783 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 SLC25A24P2-201ENST00000415059 510 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 BCRP2-202ENST00000447763 634 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 BCRP6-201ENST00000510112 632 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 BCRP7-201ENST00000511549 544 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 TIMM17BP1-201ENST00000545713 516 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 C2orf69P2-201ENST00000562032 1123 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 RARRES2P5-201ENST00000564013 466 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 AL021578.1-201ENST00000613646 709 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 AL603756.1-201ENST00000606511 2163 ntBASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.39■□□□□ 0.37
PRDM12Q9H4Q4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 RPL7P3-201ENST00000441388 714 ntBASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 TDH-203ENST00000531764 1110 ntBASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 MIR5189-201ENST00000577370 114 ntBASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM12Q9H4Q4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 IGHJ2P-201ENST00000454480 60 ntBASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.37■□□□□ 0.37
PRDM12Q9H4Q4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms