Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 HLA-H-201ENST00000383620 1096 ntBASIC11.29□□□□□ -0.6
UPK3BQ9BT76 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 SPDYE14P-201ENST00000442619 822 ntBASIC11.29□□□□□ -0.6
UPK3BQ9BT76 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 AC026150.2-201ENST00000564693 1156 ntBASIC11.29□□□□□ -0.6
UPK3BQ9BT76 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 AC073439.1-201ENST00000624121 1774 ntBASIC11.28□□□□□ -0.6
UPK3BQ9BT76 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 AC098859.1-201ENST00000502915 1238 ntBASIC11.28□□□□□ -0.6
UPK3BQ9BT76 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 AC051619.7-201ENST00000568314 623 ntBASIC11.28□□□□□ -0.6
UPK3BQ9BT76 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 AC106028.4-201ENST00000614509 607 ntBASIC11.28□□□□□ -0.6
UPK3BQ9BT76 Z92544.3-201ENST00000624747 417 ntBASIC11.28□□□□□ -0.6
UPK3BQ9BT76 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UPK3BQ9BT76 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms