Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA3Q99618 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.54■□□□□ 0.24
CDCA3Q99618 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.54■□□□□ 0.24
CDCA3Q99618 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CDCA3Q99618 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
CDCA3Q99618 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.54■□□□□ 0.24
CDCA3Q99618 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA3Q99618 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.54■□□□□ 0.24
CDCA3Q99618 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.54■□□□□ 0.24
CDCA3Q99618 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA3Q99618 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA3Q99618 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA3Q99618 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
CDCA3Q99618 AL591846.1-201ENST00000451736 433 ntBASIC16.54■□□□□ 0.24
CDCA3Q99618 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.54■□□□□ 0.24
CDCA3Q99618 RNA5SP423-201ENST00000517127 109 ntBASIC16.54■□□□□ 0.24
CDCA3Q99618 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.54■□□□□ 0.24
CDCA3Q99618 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.54■□□□□ 0.24
CDCA3Q99618 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.54■□□□□ 0.24
CDCA3Q99618 AC138951.2-201ENST00000623455 1161 ntBASIC16.54■□□□□ 0.24
CDCA3Q99618 AL008638.5-201ENST00000623814 1298 ntBASIC16.54■□□□□ 0.24
CDCA3Q99618 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA3Q99618 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA3Q99618 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.54■□□□□ 0.24
CDCA3Q99618 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA3Q99618 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.54■□□□□ 0.24
CDCA3Q99618 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDCA3Q99618 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA3Q99618 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDCA3Q99618 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA3Q99618 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDCA3Q99618 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA3Q99618 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.53■□□□□ 0.24
CDCA3Q99618 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDCA3Q99618 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDCA3Q99618 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.53■□□□□ 0.24
CDCA3Q99618 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDCA3Q99618 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.53■□□□□ 0.24
CDCA3Q99618 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.53■□□□□ 0.24
CDCA3Q99618 AC004898.1-201ENST00000451057 766 ntBASIC16.53■□□□□ 0.24
CDCA3Q99618 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.53■□□□□ 0.24
CDCA3Q99618 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA3Q99618 AP001582.1-201ENST00000525856 295 ntBASIC16.53■□□□□ 0.24
CDCA3Q99618 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CDCA3Q99618 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA3Q99618 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 AC107373.2-201ENST00000607735 490 ntBASIC16.53■□□□□ 0.24
CDCA3Q99618 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.53■□□□□ 0.24
CDCA3Q99618 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.53■□□□□ 0.24
CDCA3Q99618 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.53■□□□□ 0.24
CDCA3Q99618 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDCA3Q99618 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.53■□□□□ 0.24
CDCA3Q99618 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.53■□□□□ 0.24
CDCA3Q99618 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDCA3Q99618 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.52■□□□□ 0.24
CDCA3Q99618 PCDHB18P-201ENST00000524813 2368 ntBASIC16.52■□□□□ 0.24
CDCA3Q99618 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
CDCA3Q99618 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.52■□□□□ 0.24
CDCA3Q99618 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA3Q99618 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA3Q99618 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA3Q99618 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA3Q99618 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDCA3Q99618 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA3Q99618 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA3Q99618 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA3Q99618 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA3Q99618 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CDCA3Q99618 AL133267.1-201ENST00000398220 340 ntBASIC16.52■□□□□ 0.24
CDCA3Q99618 CD8B2-202ENST00000417670 633 ntBASIC16.52■□□□□ 0.24
CDCA3Q99618 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDCA3Q99618 FAM197Y7-201ENST00000432892 766 ntBASIC16.52■□□□□ 0.24
CDCA3Q99618 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.52■□□□□ 0.24
CDCA3Q99618 IGHJ2P-201ENST00000454480 60 ntBASIC16.52■□□□□ 0.24
CDCA3Q99618 AKR7A2P1-201ENST00000460134 915 ntBASIC16.52■□□□□ 0.24
CDCA3Q99618 AC091804.1-201ENST00000486888 567 ntBASIC16.52■□□□□ 0.24
CDCA3Q99618 SCARNA20.5-201ENST00000516991 142 ntBASIC16.52■□□□□ 0.24
CDCA3Q99618 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.52■□□□□ 0.24
CDCA3Q99618 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.52■□□□□ 0.24
CDCA3Q99618 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms