Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.29■□□□□ 0.04
COL21A1Q96P44 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 AC068587.6-202ENST00000641839 5619 ntBASIC15.28■□□□□ 0.04
COL21A1Q96P44 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 KRT18P13-201ENST00000400056 1290 ntBASIC15.28■□□□□ 0.04
COL21A1Q96P44 UPF3AP3-201ENST00000420996 769 ntBASIC15.28■□□□□ 0.04
COL21A1Q96P44 GPX1P2-201ENST00000429271 606 ntBASIC15.28■□□□□ 0.04
COL21A1Q96P44 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 ACTG1P14-201ENST00000446382 1122 ntBASIC15.28■□□□□ 0.04
COL21A1Q96P44 ALG1L5P-201ENST00000482043 771 ntBASIC15.28■□□□□ 0.04
COL21A1Q96P44 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 AC099522.2-201ENST00000607001 744 ntBASIC15.28■□□□□ 0.04
COL21A1Q96P44 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
COL21A1Q96P44 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL21A1Q96P44 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 WASH6P-202ENST00000359512 1437 ntBASIC15.27■□□□□ 0.04
COL21A1Q96P44 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 CDC14C-201ENST00000428251 1719 ntBASIC15.27■□□□□ 0.04
COL21A1Q96P44 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL21A1Q96P44 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 RPSAP43-201ENST00000402237 625 ntBASIC15.27■□□□□ 0.04
COL21A1Q96P44 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 KRT18P34-201ENST00000488218 1270 ntBASIC15.27■□□□□ 0.04
COL21A1Q96P44 LINC02447-202ENST00000501888 2146 ntBASIC15.27■□□□□ 0.04
COL21A1Q96P44 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 FAM86C2P-203ENST00000528684 1004 ntBASIC15.27■□□□□ 0.04
COL21A1Q96P44 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
COL21A1Q96P44 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.27■□□□□ 0.03
COL21A1Q96P44 PRAL-201ENST00000624952 3286 ntBASIC15.27■□□□□ 0.03
COL21A1Q96P44 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.27■□□□□ 0.03
COL21A1Q96P44 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.27■□□□□ 0.03
COL21A1Q96P44 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.27■□□□□ 0.03
COL21A1Q96P44 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.27■□□□□ 0.03
COL21A1Q96P44 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
COL21A1Q96P44 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL21A1Q96P44 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms