Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TEX28P2-201ENST00000617764 1221 ntBASIC16.59■□□□□ 0.25
RPRD1AQ96P16 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.59■□□□□ 0.25
RPRD1AQ96P16 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.59■□□□□ 0.25
RPRD1AQ96P16 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RPRD1AQ96P16 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.58■□□□□ 0.25
RPRD1AQ96P16 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RPRD1AQ96P16 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RPRD1AQ96P16 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RPRD1AQ96P16 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RPRD1AQ96P16 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
RPRD1AQ96P16 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.58■□□□□ 0.25
RPRD1AQ96P16 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RPRD1AQ96P16 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 AC004987.2-201ENST00000395959 1148 ntBASIC16.58■□□□□ 0.24
RPRD1AQ96P16 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 AL590560.3-201ENST00000623350 461 ntBASIC16.58■□□□□ 0.24
RPRD1AQ96P16 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.58■□□□□ 0.24
RPRD1AQ96P16 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.58■□□□□ 0.24
RPRD1AQ96P16 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RPRD1AQ96P16 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 AC124067.4-201ENST00000519691 2379 ntBASIC16.57■□□□□ 0.24
RPRD1AQ96P16 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 AC134407.2-201ENST00000625089 1978 ntBASIC16.57■□□□□ 0.24
RPRD1AQ96P16 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 AP001282.1-201ENST00000531301 1499 ntBASIC16.57■□□□□ 0.24
RPRD1AQ96P16 KRT8P12-202ENST00000472924 1397 ntBASIC16.57■□□□□ 0.24
RPRD1AQ96P16 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 INGX-202ENST00000489074 768 ntBASIC16.57■□□□□ 0.24
RPRD1AQ96P16 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPRD1AQ96P16 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms