Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BRF1Q92994 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRF1Q92994 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.96■□□□□ 0.63
BRF1Q92994 AC211486.1-202ENST00000416371 468 ntBASIC18.96■□□□□ 0.63
BRF1Q92994 KRT18P32-201ENST00000424695 1287 ntBASIC18.96■□□□□ 0.63
BRF1Q92994 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRF1Q92994 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF1Q92994 AC211476.1-201ENST00000503899 468 ntBASIC18.96■□□□□ 0.63
BRF1Q92994 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
BRF1Q92994 AP000344.2-201ENST00000512987 629 ntBASIC18.96■□□□□ 0.63
BRF1Q92994 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF1Q92994 RARRES2P9-201ENST00000565168 469 ntBASIC18.96■□□□□ 0.63
BRF1Q92994 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF1Q92994 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF1Q92994 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
BRF1Q92994 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRF1Q92994 AL691432.1-201ENST00000596308 1422 ntBASIC18.96■□□□□ 0.63
BRF1Q92994 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.96■□□□□ 0.63
BRF1Q92994 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
BRF1Q92994 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRF1Q92994 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRF1Q92994 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
BRF1Q92994 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRF1Q92994 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF1Q92994 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRF1Q92994 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRF1Q92994 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
BRF1Q92994 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF1Q92994 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.95■□□□□ 0.62
BRF1Q92994 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.95■□□□□ 0.62
BRF1Q92994 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BRF1Q92994 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.95■□□□□ 0.62
BRF1Q92994 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.95■□□□□ 0.62
BRF1Q92994 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
BRF1Q92994 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.95■□□□□ 0.62
BRF1Q92994 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
BRF1Q92994 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.95■□□□□ 0.62
BRF1Q92994 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
BRF1Q92994 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.95■□□□□ 0.62
BRF1Q92994 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 AC055717.3-201ENST00000622967 595 ntBASIC18.95■□□□□ 0.62
BRF1Q92994 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
BRF1Q92994 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BRF1Q92994 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BRF1Q92994 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
BRF1Q92994 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
BRF1Q92994 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRF1Q92994 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
BRF1Q92994 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF1Q92994 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
BRF1Q92994 BNIP3P1-202ENST00000550043 1585 ntBASIC18.94■□□□□ 0.62
BRF1Q92994 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF1Q92994 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF1Q92994 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
BRF1Q92994 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF1Q92994 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.94■□□□□ 0.62
BRF1Q92994 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF1Q92994 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.94■□□□□ 0.62
BRF1Q92994 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
BRF1Q92994 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
BRF1Q92994 GPS2P2-201ENST00000430745 888 ntBASIC18.94■□□□□ 0.62
BRF1Q92994 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.94■□□□□ 0.62
BRF1Q92994 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.94■□□□□ 0.62
BRF1Q92994 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.94■□□□□ 0.62
BRF1Q92994 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.94■□□□□ 0.62
BRF1Q92994 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
BRF1Q92994 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.94■□□□□ 0.62
BRF1Q92994 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.94■□□□□ 0.62
BRF1Q92994 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.94■□□□□ 0.62
BRF1Q92994 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF1Q92994 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF1Q92994 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.94■□□□□ 0.62
BRF1Q92994 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
BRF1Q92994 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.94■□□□□ 0.62
BRF1Q92994 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF1Q92994 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.94■□□□□ 0.62
BRF1Q92994 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF1Q92994 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.94■□□□□ 0.62
BRF1Q92994 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.94■□□□□ 0.62
BRF1Q92994 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRF1Q92994 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF1Q92994 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF1Q92994 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.93■□□□□ 0.62
BRF1Q92994 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRF1Q92994 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
BRF1Q92994 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRF1Q92994 AC018892.3-201ENST00000623986 2499 ntBASIC18.93■□□□□ 0.62
BRF1Q92994 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF1Q92994 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF1Q92994 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF1Q92994 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms