Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RPGRQ92834 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRQ92834 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.68■□□□□ 0.74
RPGRQ92834 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RPGRQ92834 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRQ92834 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.68■□□□□ 0.74
RPGRQ92834 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.68■□□□□ 0.74
RPGRQ92834 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.68■□□□□ 0.74
RPGRQ92834 AC007551.1-201ENST00000457394 519 ntBASIC19.68■□□□□ 0.74
RPGRQ92834 VDAC1P7-201ENST00000462417 847 ntBASIC19.68■□□□□ 0.74
RPGRQ92834 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RPGRQ92834 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RPGRQ92834 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.68■□□□□ 0.74
RPGRQ92834 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.68■□□□□ 0.74
RPGRQ92834 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRQ92834 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRQ92834 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRQ92834 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRQ92834 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RPGRQ92834 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRQ92834 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRQ92834 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.68■□□□□ 0.74
RPGRQ92834 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.67■□□□□ 0.74
RPGRQ92834 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.67■□□□□ 0.74
RPGRQ92834 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RPGRQ92834 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.67■□□□□ 0.74
RPGRQ92834 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.67■□□□□ 0.74
RPGRQ92834 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.67■□□□□ 0.74
RPGRQ92834 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.67■□□□□ 0.74
RPGRQ92834 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.67■□□□□ 0.74
RPGRQ92834 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.67■□□□□ 0.74
RPGRQ92834 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RPGRQ92834 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRQ92834 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.67■□□□□ 0.74
RPGRQ92834 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.67■□□□□ 0.74
RPGRQ92834 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RPGRQ92834 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.67■□□□□ 0.74
RPGRQ92834 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.66■□□□□ 0.74
RPGRQ92834 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.66■□□□□ 0.74
RPGRQ92834 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.66■□□□□ 0.74
RPGRQ92834 AC092933.1-201ENST00000393644 945 ntBASIC19.66■□□□□ 0.74
RPGRQ92834 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.66■□□□□ 0.74
RPGRQ92834 BAATP1-201ENST00000412284 1225 ntBASIC19.66■□□□□ 0.74
RPGRQ92834 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.66■□□□□ 0.74
RPGRQ92834 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.66■□□□□ 0.74
RPGRQ92834 PHKG1P2-201ENST00000457537 863 ntBASIC19.66■□□□□ 0.74
RPGRQ92834 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.66■□□□□ 0.74
RPGRQ92834 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.66■□□□□ 0.74
RPGRQ92834 AP000812.2-201ENST00000538934 718 ntBASIC19.66■□□□□ 0.74
RPGRQ92834 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.66■□□□□ 0.74
RPGRQ92834 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.66■□□□□ 0.74
RPGRQ92834 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.66■□□□□ 0.74
RPGRQ92834 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.66■□□□□ 0.74
RPGRQ92834 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 REXO1L8P-201ENST00000604378 1897 ntBASIC19.66■□□□□ 0.74
RPGRQ92834 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
RPGRQ92834 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.66■□□□□ 0.74
RPGRQ92834 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRQ92834 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RPGRQ92834 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RPGRQ92834 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRQ92834 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
RPGRQ92834 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
RPGRQ92834 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RPGRQ92834 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.65■□□□□ 0.74
RPGRQ92834 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRQ92834 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms