Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SHC3Q92529 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SHC3Q92529 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC3Q92529 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.13■□□□□ 0.33
SHC3Q92529 AL353705.2-201ENST00000428243 662 ntBASIC17.13■□□□□ 0.33
SHC3Q92529 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC3Q92529 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC3Q92529 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.13■□□□□ 0.33
SHC3Q92529 AC105021.1-202ENST00000570572 669 ntBASIC17.13■□□□□ 0.33
SHC3Q92529 MIR4313-201ENST00000580760 101 ntBASIC17.13■□□□□ 0.33
SHC3Q92529 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC3Q92529 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC3Q92529 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 AC092384.3-202ENST00000564646 2873 ntBASIC17.13■□□□□ 0.33
SHC3Q92529 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHC3Q92529 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC3Q92529 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.13■□□□□ 0.33
SHC3Q92529 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SHC3Q92529 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC3Q92529 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC3Q92529 AL139384.1-201ENST00000612143 3047 ntBASIC17.13■□□□□ 0.33
SHC3Q92529 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.12■□□□□ 0.33
SHC3Q92529 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 AC020658.6-201ENST00000623564 1870 ntBASIC17.12■□□□□ 0.33
SHC3Q92529 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.12■□□□□ 0.33
SHC3Q92529 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SHC3Q92529 AC092850.2-201ENST00000623821 2697 ntBASIC17.12■□□□□ 0.33
SHC3Q92529 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.12■□□□□ 0.33
SHC3Q92529 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 AC134684.3-201ENST00000641758 218 ntBASIC17.12■□□□□ 0.33
SHC3Q92529 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.12■□□□□ 0.33
SHC3Q92529 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SHC3Q92529 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.12■□□□□ 0.33
SHC3Q92529 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC3Q92529 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC3Q92529 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SHC3Q92529 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.11■□□□□ 0.33
SHC3Q92529 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SHC3Q92529 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.11■□□□□ 0.33
SHC3Q92529 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.11■□□□□ 0.33
SHC3Q92529 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.11■□□□□ 0.33
SHC3Q92529 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.11■□□□□ 0.33
SHC3Q92529 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 CNN2P11-201ENST00000429351 262 ntBASIC17.11■□□□□ 0.33
SHC3Q92529 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC3Q92529 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC3Q92529 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.11■□□□□ 0.33
SHC3Q92529 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC3Q92529 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
SHC3Q92529 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC3Q92529 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC3Q92529 AC027612.4-201ENST00000605371 583 ntBASIC17.11■□□□□ 0.33
SHC3Q92529 AC007967.4-201ENST00000614700 386 ntBASIC17.11■□□□□ 0.33
SHC3Q92529 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC3Q92529 AP001059.3-201ENST00000619053 235 ntBASIC17.11■□□□□ 0.33
SHC3Q92529 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms