Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AL158211.3-201ENST00000607385 239 ntBASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 AL390754.1-201ENST00000619088 582 ntBASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
FNDC9Q8TBE3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 ME2P1-201ENST00000426028 1970 ntBASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 MTND6P24-201ENST00000440466 518 ntBASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 AC105021.1-202ENST00000570572 669 ntBASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 AC061975.2-201ENST00000581722 295 ntBASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 AC126755.1-201ENST00000525846 6405 ntBASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.53□□□□□ -0.08
FNDC9Q8TBE3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 AL035456.1-201ENST00000456064 1369 ntBASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.52□□□□□ -0.08
FNDC9Q8TBE3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms