Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
SHKBP1Q8TBC3 AL391825.1-201ENST00000457671 1364 ntBASIC16.89■□□□□ 0.3
SHKBP1Q8TBC3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SHKBP1Q8TBC3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
SHKBP1Q8TBC3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.3
SHKBP1Q8TBC3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 AC098614.1-201ENST00000368528 745 ntBASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 AC087499.6-201ENST00000411576 835 ntBASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 SRD5A3P1-201ENST00000603021 949 ntBASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 AC008494.3-201ENST00000606615 944 ntBASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 LINC01144-201ENST00000626198 1710 ntBASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 SLC7A15P-201ENST00000424028 1363 ntBASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHKBP1Q8TBC3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 MIR6069-201ENST00000620069 79 ntBASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 U82695.1-201ENST00000635752 1889 ntBASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHKBP1Q8TBC3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AC092364.2-201ENST00000596710 2692 ntBASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AC092850.2-201ENST00000623821 2697 ntBASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 U91328.1-201ENST00000437528 223 ntBASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AL589987.1-201ENST00000453380 819 ntBASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AL008721.1-201ENST00000609964 604 ntBASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 IGHV3-72-202ENST00000621503 303 ntBASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 AC007431.3-201ENST00000623221 587 ntBASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.87■□□□□ 0.29
SHKBP1Q8TBC3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms