Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SEMA6DQ8NFY4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SEMA6DQ8NFY4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SEMA6DQ8NFY4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEMA6DQ8NFY4 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.18□□□□□ -0.14
SEMA6DQ8NFY4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEMA6DQ8NFY4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEMA6DQ8NFY4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEMA6DQ8NFY4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEMA6DQ8NFY4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 AC109635.5-201ENST00000533593 962 ntBASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 AC010491.1-201ENST00000563101 2797 ntBASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.17□□□□□ -0.14
SEMA6DQ8NFY4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 CNN2P11-201ENST00000429351 262 ntBASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 HTR5BP-201ENST00000430851 1154 ntBASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 KRT18P34-201ENST00000488218 1270 ntBASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 AL009183.1-201ENST00000603760 355 ntBASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 C20orf181-201ENST00000623918 480 ntBASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEMA6DQ8NFY4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms