Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AC142381.1-201ENST00000426099 345 ntBASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 FAM86C2P-203ENST00000528684 1004 ntBASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AC073389.1-201ENST00000595595 795 ntBASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 AL603832.2-201ENST00000566195 2125 ntBASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIMC1Q8NDZ2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 AP003680.1-201ENST00000598970 3660 ntBASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 MIR346-201ENST00000362234 95 ntBASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 FAM58DP-201ENST00000428076 619 ntBASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 AL592309.1-201ENST00000443127 649 ntBASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 RN7SL589P-201ENST00000481268 310 ntBASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 AP000842.3-202ENST00000569238 1080 ntBASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 AL513210.1-201ENST00000629608 234 ntBASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.22■□□□□ 0.03
SIMC1Q8NDZ2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms