Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 CDC14C-201ENST00000428251 1719 ntBASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 LINC01144-201ENST00000626198 1710 ntBASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 AL442647.2-201ENST00000429864 857 ntBASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 RN7SL399P-201ENST00000471648 279 ntBASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 AC233724.13-201ENST00000598383 410 ntBASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 AC006538.1-201ENST00000567905 1585 ntBASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 AL162726.2-201ENST00000438986 1017 ntBASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 AC036164.1-201ENST00000570544 333 ntBASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPOQ8N3V7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms