Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 HAUS4P1-201ENST00000406739 1145 ntBASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 SLC25A6P2-201ENST00000497974 877 ntBASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 AL160237.2-201ENST00000556165 472 ntBASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 AL121894.2-201ENST00000602977 491 ntBASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 IFNL4P1-201ENST00000607083 540 ntBASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 PTCHD3P3-201ENST00000403073 906 ntBASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 RN7SL510P-201ENST00000581311 263 ntBASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 NKAPP1-205ENST00000585790 367 ntBASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 AC129492.6-201ENST00000611383 1305 ntBASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM42Q8IWZ5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
TRIM42Q8IWZ5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM42Q8IWZ5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms