Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VRK2Q86Y07 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VRK2Q86Y07 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
VRK2Q86Y07 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
VRK2Q86Y07 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VRK2Q86Y07 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 AC092850.2-201ENST00000623821 2697 ntBASIC14.91□□□□□ -0.02
VRK2Q86Y07 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.91□□□□□ -0.02
VRK2Q86Y07 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 TFAMP1-201ENST00000412727 736 ntBASIC14.91□□□□□ -0.02
VRK2Q86Y07 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.91□□□□□ -0.02
VRK2Q86Y07 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 AC027307.2-201ENST00000591252 911 ntBASIC14.91□□□□□ -0.02
VRK2Q86Y07 SPTSSB-204ENST00000617024 1292 ntBASIC14.91□□□□□ -0.02
VRK2Q86Y07 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 CICP13-201ENST00000422015 2789 ntBASIC14.91□□□□□ -0.02
VRK2Q86Y07 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 DBET-201ENST00000630918 3363 ntBASIC14.91□□□□□ -0.02
VRK2Q86Y07 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.91□□□□□ -0.02
VRK2Q86Y07 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 AKAP8P1-201ENST00000434743 1349 ntBASIC14.91□□□□□ -0.02
VRK2Q86Y07 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK2Q86Y07 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 AL596257.1-201ENST00000641463 2694 ntBASIC14.9□□□□□ -0.02
VRK2Q86Y07 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.9□□□□□ -0.02
VRK2Q86Y07 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 AC098859.1-201ENST00000502915 1238 ntBASIC14.9□□□□□ -0.02
VRK2Q86Y07 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 AC105233.2-201ENST00000523697 349 ntBASIC14.9□□□□□ -0.02
VRK2Q86Y07 AF228730.5-201ENST00000530288 346 ntBASIC14.9□□□□□ -0.02
VRK2Q86Y07 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK2Q86Y07 AC092902.6-201ENST00000641783 218 ntBASIC14.9□□□□□ -0.02
VRK2Q86Y07 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 AC126177.1-201ENST00000547829 2218 ntBASIC14.9□□□□□ -0.02
VRK2Q86Y07 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
VRK2Q86Y07 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms