Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.11■□□□□ 0.17
LDB1Q86U70 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.11■□□□□ 0.17
LDB1Q86U70 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LDB1Q86U70 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.11■□□□□ 0.17
LDB1Q86U70 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.11■□□□□ 0.17
LDB1Q86U70 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LDB1Q86U70 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.1■□□□□ 0.17
LDB1Q86U70 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.1■□□□□ 0.17
LDB1Q86U70 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LDB1Q86U70 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.1■□□□□ 0.17
LDB1Q86U70 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 RPSAP43-201ENST00000402237 625 ntBASIC16.1■□□□□ 0.17
LDB1Q86U70 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
LDB1Q86U70 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.1■□□□□ 0.17
LDB1Q86U70 DNAJB3-201ENST00000446806 729 ntBASIC16.1■□□□□ 0.17
LDB1Q86U70 RNA5SP410-201ENST00000516285 106 ntBASIC16.1■□□□□ 0.17
LDB1Q86U70 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.1■□□□□ 0.17
LDB1Q86U70 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.1■□□□□ 0.17
LDB1Q86U70 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
LDB1Q86U70 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.1■□□□□ 0.17
LDB1Q86U70 AC022145.2-201ENST00000598203 171 ntBASIC16.1■□□□□ 0.17
LDB1Q86U70 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.1■□□□□ 0.17
LDB1Q86U70 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 TSPY26P-202ENST00000565928 3884 ntBASIC16.1■□□□□ 0.17
LDB1Q86U70 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LDB1Q86U70 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.1■□□□□ 0.17
LDB1Q86U70 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LDB1Q86U70 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.1■□□□□ 0.17
LDB1Q86U70 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LDB1Q86U70 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.1■□□□□ 0.17
LDB1Q86U70 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.1■□□□□ 0.17
LDB1Q86U70 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB1Q86U70 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.1■□□□□ 0.17
LDB1Q86U70 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LDB1Q86U70 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LDB1Q86U70 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LDB1Q86U70 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB1Q86U70 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.09■□□□□ 0.17
LDB1Q86U70 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LDB1Q86U70 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.09■□□□□ 0.17
LDB1Q86U70 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB1Q86U70 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB1Q86U70 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.09■□□□□ 0.17
LDB1Q86U70 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB1Q86U70 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB1Q86U70 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.09■□□□□ 0.17
LDB1Q86U70 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.09■□□□□ 0.17
LDB1Q86U70 AC092865.5-201ENST00000545435 363 ntBASIC16.09■□□□□ 0.17
LDB1Q86U70 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.09■□□□□ 0.17
LDB1Q86U70 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB1Q86U70 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.09■□□□□ 0.17
LDB1Q86U70 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LDB1Q86U70 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.09■□□□□ 0.17
LDB1Q86U70 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LDB1Q86U70 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB1Q86U70 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LDB1Q86U70 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB1Q86U70 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB1Q86U70 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LDB1Q86U70 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LDB1Q86U70 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LDB1Q86U70 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LDB1Q86U70 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LDB1Q86U70 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.08■□□□□ 0.17
LDB1Q86U70 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.08■□□□□ 0.17
LDB1Q86U70 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LDB1Q86U70 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
LDB1Q86U70 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.08■□□□□ 0.17
LDB1Q86U70 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms