Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 MIR1227-201ENST00000408484 88 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AC022217.1-201ENST00000521069 738 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AC005357.2-202ENST00000590507 1060 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AC025181.2-201ENST00000606994 802 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AC008132.1-202ENST00000342005 1389 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AL596276.2-201ENST00000447525 331 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 RN7SL818P-201ENST00000485099 259 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 RN7SL725P-201ENST00000606439 259 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AZGP1P1-201ENST00000411909 902 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 RNA5SP486-201ENST00000515961 83 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 COX6A1P2-201ENST00000620597 330 ntBASIC13.3□□□□□ -0.28
CSMD2Q7Z408 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CSMD2Q7Z408 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 AC145423.3-201ENST00000615987 467 ntBASIC13.29□□□□□ -0.28
CSMD2Q7Z408 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 AL390961.4-201ENST00000623958 2535 ntBASIC13.29□□□□□ -0.28
CSMD2Q7Z408 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.29□□□□□ -0.28
CSMD2Q7Z408 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.29□□□□□ -0.28
CSMD2Q7Z408 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms