Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 AL442647.2-201ENST00000429864 857 ntBASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 AC091271.1-201ENST00000611877 1162 ntBASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
OTOP1Q7RTM1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 CALR4P-201ENST00000431943 946 ntBASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 AC079328.1-201ENST00000560358 952 ntBASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 AL118558.3-201ENST00000607414 1079 ntBASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 ME2P1-201ENST00000426028 1970 ntBASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 AC005052.1-201ENST00000625181 2492 ntBASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.49■□□□□ 0.55
OTOP1Q7RTM1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OTOP1Q7RTM1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms