Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 KRT18P27-201ENST00000427733 1299 ntBASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 AC108751.1-201ENST00000490852 363 ntBASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 C20orf181-201ENST00000623918 480 ntBASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 AP000867.4-201ENST00000641616 219 ntBASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
CCNI2Q6ZMN8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCNI2Q6ZMN8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CCNI2Q6ZMN8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
CCNI2Q6ZMN8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 SPCS2P1-201ENST00000561636 679 ntBASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 AL590787.1-201ENST00000568856 1315 ntBASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNI2Q6ZMN8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 AC106881.1-201ENST00000605849 3329 ntBASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 MPDU1-223ENST00000582151 728 ntBASIC17.13■□□□□ 0.33
CCNI2Q6ZMN8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms