Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
NIPAL3Q6P499 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NIPAL3Q6P499 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.71□□□□□ -0.06
NIPAL3Q6P499 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 BX842568.4-201ENST00000421222 227 ntBASIC14.7□□□□□ -0.06
NIPAL3Q6P499 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 DNAJB3-201ENST00000446806 729 ntBASIC14.7□□□□□ -0.06
NIPAL3Q6P499 KRT18P34-201ENST00000488218 1270 ntBASIC14.7□□□□□ -0.06
NIPAL3Q6P499 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NIPAL3Q6P499 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 AC092865.5-201ENST00000545435 363 ntBASIC14.69□□□□□ -0.06
NIPAL3Q6P499 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 C20orf181-201ENST00000623918 480 ntBASIC14.69□□□□□ -0.06
NIPAL3Q6P499 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NIPAL3Q6P499 AC008677.1-201ENST00000519230 1561 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms