Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 KRT18P6-201ENST00000555540 1265 ntBASIC12.24□□□□□ -0.45
MRPL54Q6P161 AC013726.1-201ENST00000563747 2285 ntBASIC12.24□□□□□ -0.45
MRPL54Q6P161 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL54Q6P161 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL54Q6P161 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.23□□□□□ -0.45
MRPL54Q6P161 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 KRT8P39-201ENST00000396270 1433 ntBASIC12.23□□□□□ -0.45
MRPL54Q6P161 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 AL359183.1-201ENST00000623796 2132 ntBASIC12.23□□□□□ -0.45
MRPL54Q6P161 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
MRPL54Q6P161 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL54Q6P161 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms