Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPGS2Q68CL5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AC007274.1-201ENST00000439805 662 ntBASIC16.71■□□□□ 0.27
TPGS2Q68CL5 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AC010319.3-201ENST00000597028 470 ntBASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AC097359.3-201ENST00000603982 1210 ntBASIC16.71■□□□□ 0.27
TPGS2Q68CL5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.71■□□□□ 0.27
TPGS2Q68CL5 AD000864.1-201ENST00000624076 2295 ntBASIC16.71■□□□□ 0.27
TPGS2Q68CL5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.7■□□□□ 0.26
TPGS2Q68CL5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 TMEM14DP-201ENST00000422205 345 ntBASIC16.7■□□□□ 0.26
TPGS2Q68CL5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 KRT18P64-201ENST00000434946 1219 ntBASIC16.7■□□□□ 0.26
TPGS2Q68CL5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.7■□□□□ 0.26
TPGS2Q68CL5 ENPP7P5-201ENST00000541031 1031 ntBASIC16.7■□□□□ 0.26
TPGS2Q68CL5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 AC008735.3-201ENST00000596646 500 ntBASIC16.7■□□□□ 0.26
TPGS2Q68CL5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.7■□□□□ 0.26
TPGS2Q68CL5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPGS2Q68CL5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms