Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 KRT18P25-201ENST00000508931 1278 ntBASIC19.96■□□□□ 0.79
RC3H1Q5TC82 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.96■□□□□ 0.79
RC3H1Q5TC82 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 AC005695.3-201ENST00000614522 232 ntBASIC19.96■□□□□ 0.79
RC3H1Q5TC82 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 AC138028.6-201ENST00000616106 1482 ntBASIC19.96■□□□□ 0.79
RC3H1Q5TC82 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RC3H1Q5TC82 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 IGHJ2P-201ENST00000454480 60 ntBASIC19.95■□□□□ 0.78
RC3H1Q5TC82 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 RNA5SP486-201ENST00000515961 83 ntBASIC19.95■□□□□ 0.78
RC3H1Q5TC82 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 AP006547.1-201ENST00000563435 692 ntBASIC19.95■□□□□ 0.78
RC3H1Q5TC82 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 AC006453.4-201ENST00000636949 1252 ntBASIC19.95■□□□□ 0.78
RC3H1Q5TC82 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.95■□□□□ 0.78
RC3H1Q5TC82 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 UBALD1-205ENST00000590891 2641 ntBASIC19.94■□□□□ 0.78
RC3H1Q5TC82 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 BX284668.4-201ENST00000453917 508 ntBASIC19.94■□□□□ 0.78
RC3H1Q5TC82 AC091804.1-201ENST00000486888 567 ntBASIC19.94■□□□□ 0.78
RC3H1Q5TC82 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 RN7SL190P-201ENST00000582519 257 ntBASIC19.94■□□□□ 0.78
RC3H1Q5TC82 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.94■□□□□ 0.78
RC3H1Q5TC82 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 HOMER2P2-201ENST00000451621 847 ntBASIC19.93■□□□□ 0.78
RC3H1Q5TC82 RPSAP36-202ENST00000494591 1261 ntBASIC19.93■□□□□ 0.78
RC3H1Q5TC82 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms