Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 PRAL-201ENST00000624952 3286 ntBASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 CDC14C-201ENST00000428251 1719 ntBASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 MED15P5-201ENST00000423150 992 ntBASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 PMS2P1-201ENST00000431037 1228 ntBASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 AC140113.2-201ENST00000604370 208 ntBASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 AC023141.13-201ENST00000604991 943 ntBASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 AC010507.1-201ENST00000633895 436 ntBASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 AC112504.1-201ENST00000623415 1841 ntBASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 AC012569.1-201ENST00000591191 1524 ntBASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ATPAF1Q5TC12 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 KRT18P2-201ENST00000447938 1258 ntBASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 AL513480.1-201ENST00000451731 511 ntBASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 LINC02447-202ENST00000501888 2146 ntBASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 AL031432.2-201ENST00000566714 459 ntBASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 AL928711.1-201ENST00000570165 459 ntBASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms