Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM35AQ53FP2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM35AQ53FP2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM35AQ53FP2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TMEM35AQ53FP2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM35AQ53FP2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 AL136982.4-201ENST00000437689 1740 ntBASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 AC105021.1-202ENST00000570572 669 ntBASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 AC027612.4-201ENST00000605371 583 ntBASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 AC008894.3-201ENST00000624324 3103 ntBASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 LINC02199-201ENST00000506655 2702 ntBASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM35AQ53FP2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 EEF1DP4-201ENST00000446006 880 ntBASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 HLA-J-203ENST00000494367 1087 ntBASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 MIR6080-201ENST00000617359 66 ntBASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM35AQ53FP2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 AC007950.2-201ENST00000615045 2347 ntBASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 KRT8P37-201ENST00000451609 1420 ntBASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM35AQ53FP2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms