Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 MIR8072-201ENST00000614241 80 ntBASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 RPSAP52-203ENST00000622976 1023 ntBASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 USP32P1-208ENST00000506594 1164 ntBASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 AC061975.2-201ENST00000581722 295 ntBASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 AC024267.1-201ENST00000582320 895 ntBASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 AC026979.3-201ENST00000607315 403 ntBASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 MIR6069-201ENST00000620069 79 ntBASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.17■□□□□ 0.34
CTC1Q2NKJ3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 AL671710.1-201ENST00000610245 2349 ntBASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 LINC02012-201ENST00000608206 1725 ntBASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.16■□□□□ 0.34
CTC1Q2NKJ3 AC013467.2-201ENST00000605472 835 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms