Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SPHKAPQ2M3C7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPHKAPQ2M3C7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 BRWD1P1-201ENST00000401091 371 ntBASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 AC007969.1-201ENST00000433675 447 ntBASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 FAM8A2P-201ENST00000528813 1142 ntBASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 MIR6787-201ENST00000616675 61 ntBASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 AL138709.1-201ENST00000614840 1693 ntBASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SPHKAPQ2M3C7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AC007551.1-201ENST00000457394 519 ntBASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AC020907.1-201ENST00000616460 1350 ntBASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 BCYRN1-201ENST00000418539 200 ntBASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 RPL13AP20-201ENST00000459725 609 ntBASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 C2orf69P2-201ENST00000562032 1123 ntBASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 RN7SL219P-201ENST00000582872 296 ntBASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AC010328.2-201ENST00000597698 1111 ntBASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 AC138951.2-201ENST00000623455 1161 ntBASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 ABBA01031663.1-201ENST00000635630 790 ntBASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPHKAPQ2M3C7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SPHKAPQ2M3C7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SPHKAPQ2M3C7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SPHKAPQ2M3C7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SPHKAPQ2M3C7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SPHKAPQ2M3C7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 AC005695.3-201ENST00000614522 232 ntBASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SPHKAPQ2M3C7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 CNN2P10-201ENST00000443067 918 ntBASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 AC078819.1-201ENST00000547454 765 ntBASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 AC012085.1-201ENST00000548270 765 ntBASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SPHKAPQ2M3C7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms