Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 AC009477.1-201ENST00000452936 217 ntBASIC20.85■□□□□ 0.93
CCDC27Q2M243 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 AC093512.1-201ENST00000617969 520 ntBASIC20.85■□□□□ 0.93
CCDC27Q2M243 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.85■□□□□ 0.93
CCDC27Q2M243 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 AC074338.1-201ENST00000416825 156 ntBASIC20.84■□□□□ 0.93
CCDC27Q2M243 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 CYMP-203ENST00000474680 1263 ntBASIC20.84■□□□□ 0.93
CCDC27Q2M243 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC27Q2M243 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC27Q2M243 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CCDC27Q2M243 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC27Q2M243 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC27Q2M243 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC27Q2M243 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC27Q2M243 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC27Q2M243 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CCDC27Q2M243 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC27Q2M243 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC27Q2M243 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC27Q2M243 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC27Q2M243 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CCDC27Q2M243 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC27Q2M243 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC27Q2M243 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC27Q2M243 TARDBPP1-201ENST00000442013 1203 ntBASIC20.83■□□□□ 0.93
CCDC27Q2M243 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC27Q2M243 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC27Q2M243 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC27Q2M243 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC27Q2M243 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC27Q2M243 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CCDC27Q2M243 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC27Q2M243 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CCDC27Q2M243 AC008894.3-201ENST00000624324 3103 ntBASIC20.83■□□□□ 0.92
CCDC27Q2M243 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC27Q2M243 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC27Q2M243 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC27Q2M243 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC27Q2M243 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC27Q2M243 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC27Q2M243 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
CCDC27Q2M243 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC27Q2M243 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC27Q2M243 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC27Q2M243 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC27Q2M243 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms