Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
PCDH1Q08174 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDH1Q08174 AC004987.2-201ENST00000395959 1148 ntBASIC15.55■□□□□ 0.08
PCDH1Q08174 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.55■□□□□ 0.08
PCDH1Q08174 EEF1DP4-201ENST00000446006 880 ntBASIC15.55■□□□□ 0.08
PCDH1Q08174 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDH1Q08174 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDH1Q08174 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDH1Q08174 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PCDH1Q08174 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDH1Q08174 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDH1Q08174 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDH1Q08174 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDH1Q08174 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDH1Q08174 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDH1Q08174 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH1Q08174 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDH1Q08174 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDH1Q08174 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCDH1Q08174 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH1Q08174 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 AL592309.1-201ENST00000443127 649 ntBASIC15.54■□□□□ 0.08
PCDH1Q08174 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PCDH1Q08174 IGHV3-62-201ENST00000520057 340 ntBASIC15.54■□□□□ 0.08
PCDH1Q08174 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH1Q08174 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH1Q08174 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH1Q08174 AC022145.2-201ENST00000598203 171 ntBASIC15.54■□□□□ 0.08
PCDH1Q08174 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.54■□□□□ 0.08
PCDH1Q08174 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH1Q08174 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH1Q08174 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH1Q08174 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDH1Q08174 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDH1Q08174 AC008741.2-201ENST00000612792 3115 ntBASIC15.53■□□□□ 0.08
PCDH1Q08174 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 AC063926.3-201ENST00000624734 5658 ntBASIC15.53■□□□□ 0.08
PCDH1Q08174 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH1Q08174 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH1Q08174 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms