Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL16A1Q07092 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.13■□□□□ 0.97
COL16A1Q07092 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
COL16A1Q07092 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
COL16A1Q07092 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
COL16A1Q07092 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.13■□□□□ 0.97
COL16A1Q07092 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL16A1Q07092 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.13■□□□□ 0.97
COL16A1Q07092 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL16A1Q07092 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.12■□□□□ 0.97
COL16A1Q07092 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.12■□□□□ 0.97
COL16A1Q07092 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL16A1Q07092 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL16A1Q07092 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COL16A1Q07092 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COL16A1Q07092 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC21.12■□□□□ 0.97
COL16A1Q07092 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL16A1Q07092 RNMTL1P1-201ENST00000454103 560 ntBASIC21.12■□□□□ 0.97
COL16A1Q07092 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL16A1Q07092 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL16A1Q07092 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC21.12■□□□□ 0.97
COL16A1Q07092 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC21.12■□□□□ 0.97
COL16A1Q07092 MIR4783-201ENST00000580343 82 ntBASIC21.12■□□□□ 0.97
COL16A1Q07092 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC21.12■□□□□ 0.97
COL16A1Q07092 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
COL16A1Q07092 OR10B1P-201ENST00000601666 907 ntBASIC21.12■□□□□ 0.97
COL16A1Q07092 AC138894.2-201ENST00000602838 371 ntBASIC21.12■□□□□ 0.97
COL16A1Q07092 AC051619.9-201ENST00000623237 597 ntBASIC21.12■□□□□ 0.97
COL16A1Q07092 AC068587.8-201ENST00000641239 219 ntBASIC21.12■□□□□ 0.97
COL16A1Q07092 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.12■□□□□ 0.97
COL16A1Q07092 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC21.12■□□□□ 0.97
COL16A1Q07092 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
COL16A1Q07092 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL16A1Q07092 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.12■□□□□ 0.97
COL16A1Q07092 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
COL16A1Q07092 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL16A1Q07092 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL16A1Q07092 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL16A1Q07092 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC21.11■□□□□ 0.97
COL16A1Q07092 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC21.11■□□□□ 0.97
COL16A1Q07092 RPL18P13-201ENST00000478088 569 ntBASIC21.11■□□□□ 0.97
COL16A1Q07092 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC21.11■□□□□ 0.97
COL16A1Q07092 AL160314.3-201ENST00000556041 767 ntBASIC21.11■□□□□ 0.97
COL16A1Q07092 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC21.11■□□□□ 0.97
COL16A1Q07092 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC21.11■□□□□ 0.97
COL16A1Q07092 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC21.11■□□□□ 0.97
COL16A1Q07092 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.11■□□□□ 0.97
COL16A1Q07092 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL16A1Q07092 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.11■□□□□ 0.97
COL16A1Q07092 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
COL16A1Q07092 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL16A1Q07092 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL16A1Q07092 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC21.11■□□□□ 0.97
COL16A1Q07092 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.11■□□□□ 0.97
COL16A1Q07092 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL16A1Q07092 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL16A1Q07092 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL16A1Q07092 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC21.11■□□□□ 0.97
COL16A1Q07092 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL16A1Q07092 AP001282.1-201ENST00000531301 1499 ntBASIC21.11■□□□□ 0.97
COL16A1Q07092 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
COL16A1Q07092 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL16A1Q07092 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC21.11■□□□□ 0.97
COL16A1Q07092 NEU3-205ENST00000531619 582 ntTSL 5 BASIC21.11■□□□□ 0.97
COL16A1Q07092 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC21.11■□□□□ 0.97
COL16A1Q07092 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL16A1Q07092 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
COL16A1Q07092 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.1■□□□□ 0.97
COL16A1Q07092 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 AMT-233ENST00000636522 1620 ntTSL 2 BASIC21.1■□□□□ 0.97
COL16A1Q07092 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
COL16A1Q07092 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.1■□□□□ 0.97
COL16A1Q07092 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.1■□□□□ 0.97
COL16A1Q07092 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL16A1Q07092 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC21.1■□□□□ 0.97
COL16A1Q07092 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC21.1■□□□□ 0.97
COL16A1Q07092 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC21.1■□□□□ 0.97
COL16A1Q07092 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC21.1■□□□□ 0.97
COL16A1Q07092 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC21.1■□□□□ 0.97
COL16A1Q07092 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
COL16A1Q07092 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
COL16A1Q07092 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.1■□□□□ 0.97
COL16A1Q07092 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL16A1Q07092 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms