Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 LINC00552-201ENST00000625151 2579 ntBASIC13.67□□□□□ -0.22
SSBP1Q04837 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SSBP1Q04837 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
SSBP1Q04837 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SSBP1Q04837 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.66□□□□□ -0.22
SSBP1Q04837 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.66□□□□□ -0.22
SSBP1Q04837 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SSBP1Q04837 AC091951.1-201ENST00000512854 2465 ntBASIC13.66□□□□□ -0.22
SSBP1Q04837 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
SSBP1Q04837 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.66□□□□□ -0.22
SSBP1Q04837 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.66□□□□□ -0.22
SSBP1Q04837 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 AC005521.1-201ENST00000393351 872 ntBASIC13.66□□□□□ -0.22
SSBP1Q04837 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SSBP1Q04837 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.66□□□□□ -0.22
SSBP1Q04837 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.66□□□□□ -0.22
SSBP1Q04837 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.66□□□□□ -0.22
SSBP1Q04837 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.66□□□□□ -0.22
SSBP1Q04837 MIR3909-201ENST00000579518 119 ntBASIC13.66□□□□□ -0.22
SSBP1Q04837 MIR5100-201ENST00000579544 119 ntBASIC13.66□□□□□ -0.22
SSBP1Q04837 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
SSBP1Q04837 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.66□□□□□ -0.22
SSBP1Q04837 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SSBP1Q04837 AC004706.3-202ENST00000621574 984 ntBASIC13.66□□□□□ -0.22
SSBP1Q04837 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
SSBP1Q04837 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.66□□□□□ -0.22
SSBP1Q04837 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.66□□□□□ -0.22
SSBP1Q04837 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.66□□□□□ -0.22
SSBP1Q04837 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SSBP1Q04837 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP1Q04837 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP1Q04837 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP1Q04837 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.65□□□□□ -0.22
SSBP1Q04837 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP1Q04837 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SSBP1Q04837 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SSBP1Q04837 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.65□□□□□ -0.22
SSBP1Q04837 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SSBP1Q04837 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.65□□□□□ -0.22
SSBP1Q04837 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP1Q04837 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP1Q04837 AC093724.1-201ENST00000448659 1027 ntBASIC13.65□□□□□ -0.22
SSBP1Q04837 TOB2P1-201ENST00000469761 992 ntBASIC13.65□□□□□ -0.22
SSBP1Q04837 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 AC022616.7-201ENST00000525383 220 ntBASIC13.65□□□□□ -0.22
SSBP1Q04837 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.65□□□□□ -0.22
SSBP1Q04837 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.65□□□□□ -0.22
SSBP1Q04837 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP1Q04837 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.65□□□□□ -0.22
SSBP1Q04837 GGTLC5P-201ENST00000617623 998 ntBASIC13.65□□□□□ -0.22
SSBP1Q04837 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.65□□□□□ -0.22
SSBP1Q04837 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP1Q04837 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SSBP1Q04837 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms