Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
COL10A1Q03692 AL589702.1-201ENST00000641229 1509 ntBASIC13.65□□□□□ -0.22
COL10A1Q03692 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.65□□□□□ -0.22
COL10A1Q03692 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
COL10A1Q03692 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.65□□□□□ -0.22
COL10A1Q03692 SPDYE11-202ENST00000450699 704 ntBASIC13.65□□□□□ -0.22
COL10A1Q03692 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 RN7SL589P-201ENST00000481268 310 ntBASIC13.65□□□□□ -0.22
COL10A1Q03692 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 SPDYE9P-201ENST00000570642 692 ntBASIC13.65□□□□□ -0.22
COL10A1Q03692 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.65□□□□□ -0.22
COL10A1Q03692 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
COL10A1Q03692 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.65□□□□□ -0.22
COL10A1Q03692 AL365330.1-201ENST00000607459 531 ntBASIC13.65□□□□□ -0.22
COL10A1Q03692 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 SPDYE10P-202ENST00000612005 668 ntBASIC13.65□□□□□ -0.22
COL10A1Q03692 SPDYE8P-202ENST00000612377 668 ntBASIC13.65□□□□□ -0.22
COL10A1Q03692 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COL10A1Q03692 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.65□□□□□ -0.22
COL10A1Q03692 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 AC068587.6-202ENST00000641839 5619 ntBASIC13.65□□□□□ -0.23
COL10A1Q03692 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
COL10A1Q03692 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.64□□□□□ -0.23
COL10A1Q03692 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.64□□□□□ -0.23
COL10A1Q03692 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
COL10A1Q03692 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.64□□□□□ -0.23
COL10A1Q03692 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.64□□□□□ -0.23
COL10A1Q03692 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.64□□□□□ -0.23
COL10A1Q03692 HTR5BP-201ENST00000430851 1154 ntBASIC13.64□□□□□ -0.23
COL10A1Q03692 ACTG1P14-201ENST00000446382 1122 ntBASIC13.64□□□□□ -0.23
COL10A1Q03692 ALG1L5P-201ENST00000482043 771 ntBASIC13.64□□□□□ -0.23
COL10A1Q03692 AC105233.2-201ENST00000523697 349 ntBASIC13.64□□□□□ -0.23
COL10A1Q03692 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 AF228730.5-201ENST00000530288 346 ntBASIC13.64□□□□□ -0.23
COL10A1Q03692 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.64□□□□□ -0.23
COL10A1Q03692 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 AC027307.2-201ENST00000591252 911 ntBASIC13.64□□□□□ -0.23
COL10A1Q03692 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.64□□□□□ -0.23
COL10A1Q03692 AC026120.1-201ENST00000611536 926 ntBASIC13.64□□□□□ -0.23
COL10A1Q03692 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
COL10A1Q03692 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.64□□□□□ -0.23
COL10A1Q03692 AC010491.1-201ENST00000563101 2797 ntBASIC13.64□□□□□ -0.23
COL10A1Q03692 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL10A1Q03692 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms