Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 AC013268.4-201ENST00000637413 2228 ntBASIC15.55■□□□□ 0.08
HMGCS1Q01581 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.55■□□□□ 0.08
HMGCS1Q01581 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 KRT18P3-201ENST00000451602 1288 ntBASIC15.55■□□□□ 0.08
HMGCS1Q01581 AC245100.5-201ENST00000452108 331 ntBASIC15.55■□□□□ 0.08
HMGCS1Q01581 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 KRT18P58-201ENST00000527480 1120 ntBASIC15.55■□□□□ 0.08
HMGCS1Q01581 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 FAM197Y3-203ENST00000618346 717 ntBASIC15.55■□□□□ 0.08
HMGCS1Q01581 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCS1Q01581 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGCS1Q01581 AC134407.2-201ENST00000625089 1978 ntBASIC15.55■□□□□ 0.08
HMGCS1Q01581 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 AC112191.1-201ENST00000523689 701 ntBASIC15.54■□□□□ 0.08
HMGCS1Q01581 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCS1Q01581 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCS1Q01581 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms