Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3AP84243 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
H3F3AP84243 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
H3F3AP84243 AC011477.6-201ENST00000604980 1927 ntBASIC14.41□□□□□ -0.1
H3F3AP84243 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3AP84243 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
H3F3AP84243 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3AP84243 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
H3F3AP84243 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
H3F3AP84243 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.41□□□□□ -0.1
H3F3AP84243 AC092183.1-201ENST00000469884 875 ntBASIC14.41□□□□□ -0.1
H3F3AP84243 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3AP84243 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.41□□□□□ -0.1
H3F3AP84243 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.41□□□□□ -0.1
H3F3AP84243 AC243562.2-201ENST00000561247 970 ntBASIC14.41□□□□□ -0.1
H3F3AP84243 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.41□□□□□ -0.1
H3F3AP84243 AL133215.2-201ENST00000609242 977 ntBASIC14.41□□□□□ -0.1
H3F3AP84243 AC003101.2-201ENST00000612557 442 ntBASIC14.41□□□□□ -0.1
H3F3AP84243 MIR6080-201ENST00000617359 66 ntBASIC14.41□□□□□ -0.1
H3F3AP84243 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.41□□□□□ -0.1
H3F3AP84243 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3AP84243 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3AP84243 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
H3F3AP84243 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3AP84243 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
H3F3AP84243 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3AP84243 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3AP84243 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3AP84243 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.4□□□□□ -0.1
H3F3AP84243 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3AP84243 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3AP84243 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3AP84243 AC068418.2-201ENST00000577309 3703 ntBASIC14.4□□□□□ -0.1
H3F3AP84243 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3AP84243 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3AP84243 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
H3F3AP84243 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3AP84243 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
H3F3AP84243 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3AP84243 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3AP84243 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
H3F3AP84243 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.4□□□□□ -0.1
H3F3AP84243 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3AP84243 CNN2P2-201ENST00000443536 909 ntBASIC14.4□□□□□ -0.1
H3F3AP84243 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 CNN2P3-201ENST00000450201 906 ntBASIC14.4□□□□□ -0.1
H3F3AP84243 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3AP84243 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3AP84243 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3AP84243 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3AP84243 AC004449.1-201ENST00000564240 433 ntBASIC14.4□□□□□ -0.1
H3F3AP84243 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.4□□□□□ -0.1
H3F3AP84243 RN7SL828P-201ENST00000607615 303 ntBASIC14.4□□□□□ -0.1
H3F3AP84243 AL136317.3-201ENST00000618497 906 ntBASIC14.4□□□□□ -0.1
H3F3AP84243 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3AP84243 Z92544.3-201ENST00000624747 417 ntBASIC14.4□□□□□ -0.1
H3F3AP84243 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3AP84243 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3AP84243 AL365203.3-201ENST00000609742 2057 ntBASIC14.4□□□□□ -0.1
H3F3AP84243 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
H3F3AP84243 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3AP84243 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.4□□□□□ -0.1
H3F3AP84243 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3AP84243 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
H3F3AP84243 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3AP84243 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.39□□□□□ -0.11
H3F3AP84243 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3AP84243 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3AP84243 CYP4F24P-201ENST00000586049 1580 ntBASIC14.39□□□□□ -0.11
H3F3AP84243 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
H3F3AP84243 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3AP84243 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms