Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CLDN12P56749 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CLDN12P56749 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.08□□□□□ -0.16
CLDN12P56749 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CLDN12P56749 HCG4-201ENST00000418983 998 ntBASIC14.08□□□□□ -0.16
CLDN12P56749 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
CLDN12P56749 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDN12P56749 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN12P56749 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.08□□□□□ -0.16
CLDN12P56749 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDN12P56749 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 MTDHP4-201ENST00000600287 670 ntBASIC14.08□□□□□ -0.16
CLDN12P56749 NPAP1P7-201ENST00000613027 823 ntBASIC14.08□□□□□ -0.16
CLDN12P56749 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN12P56749 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CLDN12P56749 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 FAM45BP-202ENST00000592932 1624 ntBASIC14.08□□□□□ -0.16
CLDN12P56749 TCAF2P1-201ENST00000291129 2421 ntBASIC14.07□□□□□ -0.16
CLDN12P56749 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN12P56749 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CLDN12P56749 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN12P56749 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 AC092127.1-201ENST00000567093 3455 ntBASIC14.07□□□□□ -0.16
CLDN12P56749 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.07□□□□□ -0.16
CLDN12P56749 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN12P56749 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 SART3-203ENST00000546611 1184 ntBASIC14.07□□□□□ -0.16
CLDN12P56749 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.07□□□□□ -0.16
CLDN12P56749 AL160237.2-201ENST00000556165 472 ntBASIC14.07□□□□□ -0.16
CLDN12P56749 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 AL805961.1-202ENST00000641562 540 ntBASIC14.07□□□□□ -0.16
CLDN12P56749 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN12P56749 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN12P56749 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
CLDN12P56749 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN12P56749 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN12P56749 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms