Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.09□□□□□ -0.15
FOXG1P55316 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.09□□□□□ -0.15
FOXG1P55316 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
FOXG1P55316 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXG1P55316 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXG1P55316 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.09□□□□□ -0.15
FOXG1P55316 AC069224.1-201ENST00000566372 1715 ntBASIC14.09□□□□□ -0.15
FOXG1P55316 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXG1P55316 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.09□□□□□ -0.15
FOXG1P55316 AC087499.5-201ENST00000452760 1342 ntBASIC14.09□□□□□ -0.15
FOXG1P55316 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
FOXG1P55316 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.09□□□□□ -0.15
FOXG1P55316 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
FOXG1P55316 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FOXG1P55316 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.15
FOXG1P55316 KRT8P37-201ENST00000451609 1420 ntBASIC14.08□□□□□ -0.15
FOXG1P55316 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXG1P55316 LINC02447-202ENST00000501888 2146 ntBASIC14.08□□□□□ -0.16
FOXG1P55316 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FOXG1P55316 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXG1P55316 AC009477.1-201ENST00000452936 217 ntBASIC14.08□□□□□ -0.16
FOXG1P55316 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXG1P55316 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXG1P55316 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.08□□□□□ -0.16
FOXG1P55316 RNA5SP421-201ENST00000516864 134 ntBASIC14.08□□□□□ -0.16
FOXG1P55316 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 AC044860.1-202ENST00000559481 777 ntBASIC14.08□□□□□ -0.16
FOXG1P55316 AC008738.7-201ENST00000609744 511 ntBASIC14.08□□□□□ -0.16
FOXG1P55316 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXG1P55316 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 AL033527.5-202ENST00000641632 1098 ntBASIC14.08□□□□□ -0.16
FOXG1P55316 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXG1P55316 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
FOXG1P55316 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FOXG1P55316 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FOXG1P55316 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXG1P55316 TNRC18P3-201ENST00000441896 2691 ntBASIC14.08□□□□□ -0.16
FOXG1P55316 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
FOXG1P55316 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
FOXG1P55316 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXG1P55316 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXG1P55316 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXG1P55316 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXG1P55316 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.07□□□□□ -0.16
FOXG1P55316 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXG1P55316 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FOXG1P55316 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXG1P55316 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXG1P55316 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.07□□□□□ -0.16
FOXG1P55316 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXG1P55316 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXG1P55316 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXG1P55316 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXG1P55316 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXG1P55316 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
FOXG1P55316 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms