Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH12P55289 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.07■□□□□ 0
CDH12P55289 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.07■□□□□ 0
CDH12P55289 VN2R19P-201ENST00000442399 1052 ntBASIC15.07■□□□□ 0
CDH12P55289 AC009947.1-201ENST00000444350 727 ntBASIC15.07■□□□□ 0
CDH12P55289 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CDH12P55289 AC093909.1-201ENST00000504731 1122 ntBASIC15.07■□□□□ 0
CDH12P55289 RNA5SP419-201ENST00000515908 135 ntBASIC15.07■□□□□ 0
CDH12P55289 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.07■□□□□ 0
CDH12P55289 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.07■□□□□ 0
CDH12P55289 KRT126P-201ENST00000549467 1181 ntBASIC15.07■□□□□ 0
CDH12P55289 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.07■□□□□ 0
CDH12P55289 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.07■□□□□ 0
CDH12P55289 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH12P55289 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.07■□□□□ 0
CDH12P55289 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.07■□□□□ 0
CDH12P55289 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.07■□□□□ 0
CDH12P55289 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CDH12P55289 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CDH12P55289 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH12P55289 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
CDH12P55289 AC006058.4-201ENST00000624016 1670 ntBASIC15.06■□□□□ 0
CDH12P55289 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.06■□□□□ 0
CDH12P55289 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.06■□□□□ 0
CDH12P55289 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.06■□□□□ 0
CDH12P55289 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.06■□□□□ 0
CDH12P55289 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 AC023157.3-201ENST00000619086 2088 ntBASIC15.06■□□□□ 0
CDH12P55289 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.06■□□□□ 0
CDH12P55289 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.06■□□□□ 0
CDH12P55289 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH12P55289 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.06■□□□□ 0
CDH12P55289 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 IGLL3P-201ENST00000412472 434 ntBASIC15.06■□□□□ 0
CDH12P55289 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CDH12P55289 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.06■□□□□ 0
CDH12P55289 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH12P55289 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.06■□□□□ 0
CDH12P55289 AL031432.2-201ENST00000566714 459 ntBASIC15.06■□□□□ 0
CDH12P55289 AL928711.1-201ENST00000570165 459 ntBASIC15.06■□□□□ 0
CDH12P55289 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.06■□□□□ 0
CDH12P55289 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CDH12P55289 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 AL031055.1-201ENST00000606362 631 ntBASIC15.06■□□□□ 0
CDH12P55289 AC021097.1-201ENST00000607902 574 ntBASIC15.06■□□□□ 0
CDH12P55289 AL645728.2-201ENST00000641974 660 ntBASIC15.06■□□□□ 0
CDH12P55289 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.06■□□□□ 0
CDH12P55289 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.06■□□□□ 0
CDH12P55289 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.06■□□□□ 0
CDH12P55289 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.06■□□□□ 0
CDH12P55289 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CDH12P55289 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 AC008677.1-201ENST00000519230 1561 ntBASIC15.06■□□□□ 0
CDH12P55289 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.06■□□□□ 0
CDH12P55289 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CDH12P55289 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.06■□□□□ 0
CDH12P55289 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH12P55289 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.06■□□□□ 0
CDH12P55289 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CDH12P55289 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.06■□□□□ 0
CDH12P55289 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH12P55289 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.05■□□□□ 0
CDH12P55289 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms