Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC243591.1-201ENST00000452967 1364 ntBASIC15.37■□□□□ 0.05
NR1H2P55055 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NR1H2P55055 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.37■□□□□ 0.05
NR1H2P55055 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.37■□□□□ 0.05
NR1H2P55055 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 CICP23-201ENST00000605013 2741 ntBASIC15.37■□□□□ 0.05
NR1H2P55055 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.37■□□□□ 0.05
NR1H2P55055 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.37■□□□□ 0.05
NR1H2P55055 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 SART3-203ENST00000546611 1184 ntBASIC15.37■□□□□ 0.05
NR1H2P55055 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.37■□□□□ 0.05
NR1H2P55055 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.37■□□□□ 0.05
NR1H2P55055 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NR1H2P55055 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NR1H2P55055 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 GGT3P-204ENST00000453783 1664 ntBASIC15.37■□□□□ 0.05
NR1H2P55055 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NR1H2P55055 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 AC020658.6-201ENST00000623564 1870 ntBASIC15.37■□□□□ 0.05
NR1H2P55055 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.37■□□□□ 0.05
NR1H2P55055 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NR1H2P55055 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NR1H2P55055 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H2P55055 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NR1H2P55055 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.36■□□□□ 0.05
NR1H2P55055 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
NR1H2P55055 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.36■□□□□ 0.05
NR1H2P55055 AC103564.2-201ENST00000432853 1299 ntBASIC15.36■□□□□ 0.05
NR1H2P55055 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H2P55055 RPL13AP23-201ENST00000480739 586 ntBASIC15.36■□□□□ 0.05
NR1H2P55055 IGHV3-52-201ENST00000519770 353 ntBASIC15.36■□□□□ 0.05
NR1H2P55055 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.36■□□□□ 0.05
NR1H2P55055 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.36■□□□□ 0.05
NR1H2P55055 AP000867.4-201ENST00000641616 219 ntBASIC15.36■□□□□ 0.05
NR1H2P55055 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.36■□□□□ 0.05
NR1H2P55055 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NR1H2P55055 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H2P55055 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NR1H2P55055 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H2P55055 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.36■□□□□ 0.05
NR1H2P55055 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NR1H2P55055 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H2P55055 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H2P55055 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H2P55055 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NR1H2P55055 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms