Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.54■□□□□ 0.24
ATXN3P54252 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ATXN3P54252 AL031055.1-201ENST00000606362 631 ntBASIC16.54■□□□□ 0.24
ATXN3P54252 AP001350.2-201ENST00000625104 1094 ntBASIC16.54■□□□□ 0.24
ATXN3P54252 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.54■□□□□ 0.24
ATXN3P54252 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATXN3P54252 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.54■□□□□ 0.24
ATXN3P54252 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.54■□□□□ 0.24
ATXN3P54252 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.54■□□□□ 0.24
ATXN3P54252 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATXN3P54252 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATXN3P54252 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ATXN3P54252 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ATXN3P54252 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATXN3P54252 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.53■□□□□ 0.24
ATXN3P54252 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATXN3P54252 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.53■□□□□ 0.24
ATXN3P54252 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.53■□□□□ 0.24
ATXN3P54252 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ATXN3P54252 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.53■□□□□ 0.24
ATXN3P54252 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATXN3P54252 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.53■□□□□ 0.24
ATXN3P54252 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.53■□□□□ 0.24
ATXN3P54252 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 SPDYE22P-201ENST00000582158 798 ntBASIC16.53■□□□□ 0.24
ATXN3P54252 AC003101.2-201ENST00000612557 442 ntBASIC16.53■□□□□ 0.24
ATXN3P54252 NORAD-201ENST00000565493 5339 ntBASIC16.53■□□□□ 0.24
ATXN3P54252 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.53■□□□□ 0.24
ATXN3P54252 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.53■□□□□ 0.24
ATXN3P54252 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATXN3P54252 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATXN3P54252 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.53■□□□□ 0.24
ATXN3P54252 AC100757.3-201ENST00000622361 1406 ntBASIC16.53■□□□□ 0.24
ATXN3P54252 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.52■□□□□ 0.24
ATXN3P54252 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATXN3P54252 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.52■□□□□ 0.24
ATXN3P54252 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATXN3P54252 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATXN3P54252 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATXN3P54252 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
ATXN3P54252 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.52■□□□□ 0.24
ATXN3P54252 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
ATXN3P54252 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.52■□□□□ 0.24
ATXN3P54252 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATXN3P54252 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.52■□□□□ 0.24
ATXN3P54252 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.52■□□□□ 0.24
ATXN3P54252 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATXN3P54252 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.52■□□□□ 0.24
ATXN3P54252 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.52■□□□□ 0.24
ATXN3P54252 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.52■□□□□ 0.24
ATXN3P54252 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.52■□□□□ 0.24
ATXN3P54252 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.52■□□□□ 0.24
ATXN3P54252 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATXN3P54252 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATXN3P54252 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.52■□□□□ 0.24
ATXN3P54252 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATXN3P54252 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATXN3P54252 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATXN3P54252 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
ATXN3P54252 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.52■□□□□ 0.23
ATXN3P54252 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
ATXN3P54252 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATXN3P54252 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATXN3P54252 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATXN3P54252 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.52■□□□□ 0.23
ATXN3P54252 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ATXN3P54252 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATXN3P54252 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ATXN3P54252 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.52■□□□□ 0.23
ATXN3P54252 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
ATXN3P54252 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.52■□□□□ 0.23
ATXN3P54252 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.52■□□□□ 0.23
ATXN3P54252 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATXN3P54252 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.51■□□□□ 0.23
ATXN3P54252 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 CYP2T1P-202ENST00000641596 2535 ntBASIC16.51■□□□□ 0.23
ATXN3P54252 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms