Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AL031731.1-201ENST00000642131 2094 ntBASIC17.79■□□□□ 0.44
LBX1P52954 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.79■□□□□ 0.44
LBX1P52954 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 AC020916.1-201ENST00000587762 1774 ntBASIC17.79■□□□□ 0.44
LBX1P52954 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LBX1P52954 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.79■□□□□ 0.44
LBX1P52954 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 AC018463.1-201ENST00000456674 917 ntBASIC17.79■□□□□ 0.44
LBX1P52954 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.79■□□□□ 0.44
LBX1P52954 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.79■□□□□ 0.44
LBX1P52954 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.79■□□□□ 0.44
LBX1P52954 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
LBX1P52954 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.79■□□□□ 0.44
LBX1P52954 MIR6858-201ENST00000620733 67 ntBASIC17.79■□□□□ 0.44
LBX1P52954 AC007718.1-201ENST00000621078 280 ntBASIC17.79■□□□□ 0.44
LBX1P52954 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
LBX1P52954 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
LBX1P52954 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.79■□□□□ 0.44
LBX1P52954 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LBX1P52954 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.79■□□□□ 0.44
LBX1P52954 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LBX1P52954 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.79■□□□□ 0.44
LBX1P52954 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LBX1P52954 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 AC004899.1-201ENST00000424687 1714 ntBASIC17.78■□□□□ 0.44
LBX1P52954 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
LBX1P52954 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.78■□□□□ 0.44
LBX1P52954 POU5F1P6-201ENST00000466990 990 ntBASIC17.78■□□□□ 0.44
LBX1P52954 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.78■□□□□ 0.44
LBX1P52954 ALG1L6P-201ENST00000515248 758 ntBASIC17.78■□□□□ 0.44
LBX1P52954 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LBX1P52954 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.78■□□□□ 0.44
LBX1P52954 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.78■□□□□ 0.44
LBX1P52954 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LBX1P52954 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LBX1P52954 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.78■□□□□ 0.44
LBX1P52954 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LBX1P52954 RNF165-205ENST00000588679 2904 ntBASIC17.78■□□□□ 0.44
LBX1P52954 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LBX1P52954 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.77■□□□□ 0.44
LBX1P52954 AL138799.1-201ENST00000448213 1675 ntBASIC17.77■□□□□ 0.44
LBX1P52954 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LBX1P52954 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
LBX1P52954 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.77■□□□□ 0.44
LBX1P52954 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LBX1P52954 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.77■□□□□ 0.44
LBX1P52954 KLF2P2-201ENST00000416807 1039 ntBASIC17.77■□□□□ 0.44
LBX1P52954 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.77■□□□□ 0.44
LBX1P52954 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.77■□□□□ 0.44
LBX1P52954 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.77■□□□□ 0.44
LBX1P52954 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.77■□□□□ 0.44
LBX1P52954 AC007881.3-201ENST00000608897 607 ntBASIC17.77■□□□□ 0.44
LBX1P52954 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
LBX1P52954 ZACNP1-201ENST00000612259 710 ntBASIC17.77■□□□□ 0.44
LBX1P52954 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LBX1P52954 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.77■□□□□ 0.43
LBX1P52954 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.77■□□□□ 0.43
LBX1P52954 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LBX1P52954 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
LBX1P52954 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.77■□□□□ 0.43
LBX1P52954 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.77■□□□□ 0.43
LBX1P52954 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LBX1P52954 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.76■□□□□ 0.43
LBX1P52954 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LBX1P52954 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LBX1P52954 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
LBX1P52954 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms