Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
PDX1P52945 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 HLA-V-201ENST00000429037 534 ntBASIC15.63■□□□□ 0.09
PDX1P52945 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.63■□□□□ 0.09
PDX1P52945 AC114501.2-201ENST00000439631 535 ntBASIC15.63■□□□□ 0.09
PDX1P52945 AC093004.1-201ENST00000508850 424 ntBASIC15.63■□□□□ 0.09
PDX1P52945 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.63■□□□□ 0.09
PDX1P52945 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.63■□□□□ 0.09
PDX1P52945 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 AL139011.1-202ENST00000642063 584 ntBASIC15.63■□□□□ 0.09
PDX1P52945 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PDX1P52945 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.63■□□□□ 0.09
PDX1P52945 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PDX1P52945 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
PDX1P52945 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.63■□□□□ 0.09
PDX1P52945 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.63■□□□□ 0.09
PDX1P52945 AL589702.1-201ENST00000641229 1509 ntBASIC15.63■□□□□ 0.09
PDX1P52945 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 ALOX12P2-203ENST00000570921 1945 ntBASIC15.62■□□□□ 0.09
PDX1P52945 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 AC006538.1-201ENST00000567905 1585 ntBASIC15.62■□□□□ 0.09
PDX1P52945 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PDX1P52945 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PDX1P52945 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.62■□□□□ 0.09
PDX1P52945 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.62■□□□□ 0.09
PDX1P52945 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.62■□□□□ 0.09
PDX1P52945 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.62■□□□□ 0.09
PDX1P52945 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PDX1P52945 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
PDX1P52945 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.62■□□□□ 0.09
PDX1P52945 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.62■□□□□ 0.09
PDX1P52945 GPR53P-205ENST00000457298 1084 ntBASIC15.62■□□□□ 0.09
PDX1P52945 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 IGHV3-71-201ENST00000523324 359 ntBASIC15.62■□□□□ 0.09
PDX1P52945 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.62■□□□□ 0.09
PDX1P52945 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.62■□□□□ 0.09
PDX1P52945 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PDX1P52945 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PDX1P52945 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.62■□□□□ 0.09
PDX1P52945 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PDX1P52945 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.62■□□□□ 0.09
PDX1P52945 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PDX1P52945 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.62■□□□□ 0.09
PDX1P52945 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.62■□□□□ 0.09
PDX1P52945 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDX1P52945 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.61■□□□□ 0.09
PDX1P52945 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.61■□□□□ 0.09
PDX1P52945 PCDH8P1-201ENST00000428983 2773 ntBASIC15.61■□□□□ 0.09
PDX1P52945 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PDX1P52945 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PDX1P52945 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PDX1P52945 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.61■□□□□ 0.09
PDX1P52945 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 AP006294.1-201ENST00000415407 339 ntBASIC15.61■□□□□ 0.09
PDX1P52945 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.61■□□□□ 0.09
PDX1P52945 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms