Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
BRCA2P51587 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCA2P51587 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCA2P51587 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.66■□□□□ 0.42
BRCA2P51587 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.66■□□□□ 0.42
BRCA2P51587 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
BRCA2P51587 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 HOMER2P2-201ENST00000451621 847 ntBASIC17.66■□□□□ 0.42
BRCA2P51587 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.66■□□□□ 0.42
BRCA2P51587 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.66■□□□□ 0.42
BRCA2P51587 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCA2P51587 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.66■□□□□ 0.42
BRCA2P51587 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCA2P51587 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.66■□□□□ 0.42
BRCA2P51587 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.66■□□□□ 0.42
BRCA2P51587 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
BRCA2P51587 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.66■□□□□ 0.42
BRCA2P51587 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRCA2P51587 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.66■□□□□ 0.42
BRCA2P51587 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.66■□□□□ 0.42
BRCA2P51587 CEP164P1-201ENST00000455142 418 ntBASIC17.66■□□□□ 0.42
BRCA2P51587 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.66■□□□□ 0.42
BRCA2P51587 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCA2P51587 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.66■□□□□ 0.42
BRCA2P51587 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCA2P51587 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
BRCA2P51587 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCA2P51587 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.66■□□□□ 0.42
BRCA2P51587 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.66■□□□□ 0.42
BRCA2P51587 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.66■□□□□ 0.42
BRCA2P51587 AL136301.1-201ENST00000615830 422 ntBASIC17.66■□□□□ 0.42
BRCA2P51587 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.65■□□□□ 0.42
BRCA2P51587 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.65■□□□□ 0.42
BRCA2P51587 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BRCA2P51587 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
BRCA2P51587 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.65■□□□□ 0.42
BRCA2P51587 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.65■□□□□ 0.42
BRCA2P51587 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BRCA2P51587 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
BRCA2P51587 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.65■□□□□ 0.42
BRCA2P51587 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
BRCA2P51587 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 CTBP2P4-201ENST00000513884 920 ntBASIC17.65■□□□□ 0.42
BRCA2P51587 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.65■□□□□ 0.42
BRCA2P51587 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.65■□□□□ 0.42
BRCA2P51587 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
BRCA2P51587 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.65■□□□□ 0.42
BRCA2P51587 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 RN7SL181P-201ENST00000462921 277 ntBASIC17.65■□□□□ 0.42
BRCA2P51587 SERPINA13P-202ENST00000478994 924 ntBASIC17.65■□□□□ 0.42
BRCA2P51587 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRCA2P51587 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
BRCA2P51587 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
BRCA2P51587 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
BRCA2P51587 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRCA2P51587 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRCA2P51587 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRCA2P51587 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRCA2P51587 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.64■□□□□ 0.41
BRCA2P51587 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.64■□□□□ 0.41
BRCA2P51587 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
BRCA2P51587 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BRCA2P51587 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRCA2P51587 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.64■□□□□ 0.41
BRCA2P51587 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.64■□□□□ 0.41
BRCA2P51587 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRCA2P51587 AP001094.4-201ENST00000579008 2176 ntBASIC17.64■□□□□ 0.41
BRCA2P51587 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
BRCA2P51587 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCA2P51587 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.63■□□□□ 0.41
BRCA2P51587 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BRCA2P51587 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
BRCA2P51587 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.63■□□□□ 0.41
BRCA2P51587 MIR3147-201ENST00000577811 66 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms