Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LHX2P50458 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.33□□□□□ -0.12
LHX2P50458 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX2P50458 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.33□□□□□ -0.12
LHX2P50458 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LHX2P50458 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.32□□□□□ -0.12
LHX2P50458 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.32□□□□□ -0.12
LHX2P50458 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LHX2P50458 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LHX2P50458 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.32□□□□□ -0.12
LHX2P50458 GNAQP1-201ENST00000444815 1067 ntBASIC14.32□□□□□ -0.12
LHX2P50458 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.32□□□□□ -0.12
LHX2P50458 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
LHX2P50458 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.32□□□□□ -0.12
LHX2P50458 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.32□□□□□ -0.12
LHX2P50458 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LHX2P50458 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 AL118508.1-201ENST00000613502 2345 ntBASIC14.32□□□□□ -0.12
LHX2P50458 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.32□□□□□ -0.12
LHX2P50458 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.32□□□□□ -0.12
LHX2P50458 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LHX2P50458 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LHX2P50458 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LHX2P50458 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX2P50458 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX2P50458 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LHX2P50458 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX2P50458 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX2P50458 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
LHX2P50458 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 SPDYE19P-201ENST00000338590 713 ntBASIC14.31□□□□□ -0.12
LHX2P50458 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX2P50458 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
LHX2P50458 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 PHKG1P2-201ENST00000457537 863 ntBASIC14.31□□□□□ -0.12
LHX2P50458 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.31□□□□□ -0.12
LHX2P50458 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.31□□□□□ -0.12
LHX2P50458 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX2P50458 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.31□□□□□ -0.12
LHX2P50458 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.31□□□□□ -0.12
LHX2P50458 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX2P50458 AC092337.1-201ENST00000568699 1129 ntBASIC14.31□□□□□ -0.12
LHX2P50458 AL132655.2-201ENST00000596276 594 ntBASIC14.31□□□□□ -0.12
LHX2P50458 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
LHX2P50458 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX2P50458 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX2P50458 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LHX2P50458 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX2P50458 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.31□□□□□ -0.12
LHX2P50458 AC007541.1-201ENST00000570282 1469 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms