Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2AP49459 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2AP49459 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
UBE2AP49459 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2AP49459 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
UBE2AP49459 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 AC131212.3-201ENST00000624087 4219 ntBASIC10.29□□□□□ -0.76
UBE2AP49459 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2AP49459 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
UBE2AP49459 ME2P1-201ENST00000426028 1970 ntBASIC10.29□□□□□ -0.76
UBE2AP49459 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
UBE2AP49459 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 AC073621.1-201ENST00000392730 636 ntBASIC10.29□□□□□ -0.76
UBE2AP49459 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2AP49459 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 DUSP5P1-201ENST00000441325 1139 ntBASIC10.29□□□□□ -0.76
UBE2AP49459 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.29□□□□□ -0.76
UBE2AP49459 AC018712.1-201ENST00000455767 687 ntBASIC10.29□□□□□ -0.76
UBE2AP49459 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 AC108751.1-201ENST00000490852 363 ntBASIC10.29□□□□□ -0.76
UBE2AP49459 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2AP49459 MIR4492-201ENST00000581627 80 ntBASIC10.29□□□□□ -0.76
UBE2AP49459 CYB561-216ENST00000582297 897 ntTSL 3 BASIC10.29□□□□□ -0.76
UBE2AP49459 CYGB-205ENST00000590175 830 ntTSL 3 BASIC10.29□□□□□ -0.76
UBE2AP49459 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC10.29□□□□□ -0.76
UBE2AP49459 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.29□□□□□ -0.76
UBE2AP49459 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
UBE2AP49459 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2AP49459 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 SLC9A3P2-201ENST00000447821 2021 ntBASIC10.29□□□□□ -0.76
UBE2AP49459 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2AP49459 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC10.29□□□□□ -0.76
UBE2AP49459 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2AP49459 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
UBE2AP49459 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.28□□□□□ -0.76
UBE2AP49459 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2AP49459 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC10.28□□□□□ -0.76
UBE2AP49459 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
UBE2AP49459 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2AP49459 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
UBE2AP49459 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2AP49459 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2AP49459 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2AP49459 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2AP49459 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2AP49459 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
UBE2AP49459 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2AP49459 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2AP49459 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.28□□□□□ -0.76
UBE2AP49459 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
UBE2AP49459 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2AP49459 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
UBE2AP49459 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms