Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CENPAP49450 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CENPAP49450 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.7□□□□□ -0.06
CENPAP49450 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CENPAP49450 AC067750.1-201ENST00000608826 6545 ntBASIC14.7□□□□□ -0.06
CENPAP49450 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.7□□□□□ -0.06
CENPAP49450 AL031284.1-201ENST00000419297 478 ntBASIC14.7□□□□□ -0.06
CENPAP49450 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CENPAP49450 CXCL1P1-201ENST00000502804 216 ntBASIC14.7□□□□□ -0.06
CENPAP49450 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.7□□□□□ -0.06
CENPAP49450 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.7□□□□□ -0.06
CENPAP49450 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CENPAP49450 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CENPAP49450 AL049840.3-201ENST00000602669 611 ntBASIC14.7□□□□□ -0.06
CENPAP49450 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CENPAP49450 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.7□□□□□ -0.06
CENPAP49450 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.7□□□□□ -0.06
CENPAP49450 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CENPAP49450 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
CENPAP49450 AC138969.2-201ENST00000532739 9932 ntBASIC14.7□□□□□ -0.06
CENPAP49450 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.7□□□□□ -0.06
CENPAP49450 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.7□□□□□ -0.06
CENPAP49450 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CENPAP49450 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CENPAP49450 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
CENPAP49450 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.69□□□□□ -0.06
CENPAP49450 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.69□□□□□ -0.06
CENPAP49450 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CENPAP49450 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 CRYGEP-201ENST00000412192 528 ntBASIC14.69□□□□□ -0.06
CENPAP49450 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 AC098831.1-202ENST00000438821 336 ntBASIC14.69□□□□□ -0.06
CENPAP49450 FAAHP1-202ENST00000446499 1238 ntBASIC14.69□□□□□ -0.06
CENPAP49450 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.69□□□□□ -0.06
CENPAP49450 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.69□□□□□ -0.06
CENPAP49450 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.69□□□□□ -0.06
CENPAP49450 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.69□□□□□ -0.06
CENPAP49450 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.69□□□□□ -0.06
CENPAP49450 MIR4515-201ENST00000584082 81 ntBASIC14.69□□□□□ -0.06
CENPAP49450 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.69□□□□□ -0.06
CENPAP49450 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.69□□□□□ -0.06
CENPAP49450 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 AC005622.1-201ENST00000636801 1703 ntBASIC14.69□□□□□ -0.06
CENPAP49450 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CENPAP49450 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CENPAP49450 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.68□□□□□ -0.06
CENPAP49450 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.68□□□□□ -0.06
CENPAP49450 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CENPAP49450 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CENPAP49450 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.68□□□□□ -0.06
CENPAP49450 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 U82695.1-201ENST00000635752 1889 ntBASIC14.68□□□□□ -0.06
CENPAP49450 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CENPAP49450 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CENPAP49450 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms