Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 TARDBPP1-201ENST00000442013 1203 ntBASIC15.2■□□□□ 0.02
GABRA4P48169 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.2■□□□□ 0.02
GABRA4P48169 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.2■□□□□ 0.02
GABRA4P48169 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.2■□□□□ 0.02
GABRA4P48169 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
GABRA4P48169 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
GABRA4P48169 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.2■□□□□ 0.02
GABRA4P48169 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
GABRA4P48169 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 AC084018.2-201ENST00000613093 2607 ntBASIC15.2■□□□□ 0.02
GABRA4P48169 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.19■□□□□ 0.02
GABRA4P48169 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GABRA4P48169 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.19■□□□□ 0.02
GABRA4P48169 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
GABRA4P48169 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.19■□□□□ 0.02
GABRA4P48169 RPL13P2-201ENST00000440687 659 ntBASIC15.19■□□□□ 0.02
GABRA4P48169 PHKG1P2-201ENST00000457537 863 ntBASIC15.19■□□□□ 0.02
GABRA4P48169 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 AP005018.1-201ENST00000525475 301 ntBASIC15.19■□□□□ 0.02
GABRA4P48169 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.19■□□□□ 0.02
GABRA4P48169 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
GABRA4P48169 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.19■□□□□ 0.02
GABRA4P48169 HNRNPUP1-201ENST00000554987 333 ntBASIC15.19■□□□□ 0.02
GABRA4P48169 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.19■□□□□ 0.02
GABRA4P48169 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.19■□□□□ 0.02
GABRA4P48169 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 LINC01115-203ENST00000606068 577 ntBASIC15.19■□□□□ 0.02
GABRA4P48169 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.19■□□□□ 0.02
GABRA4P48169 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.19■□□□□ 0.02
GABRA4P48169 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.19■□□□□ 0.02
GABRA4P48169 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GABRA4P48169 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.19■□□□□ 0.02
GABRA4P48169 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.19■□□□□ 0.02
GABRA4P48169 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 AC007541.1-201ENST00000570282 1469 ntBASIC15.19■□□□□ 0.02
GABRA4P48169 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.19■□□□□ 0.02
GABRA4P48169 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GABRA4P48169 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.19■□□□□ 0.02
GABRA4P48169 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.18■□□□□ 0.02
GABRA4P48169 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GABRA4P48169 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
GABRA4P48169 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.18■□□□□ 0.02
GABRA4P48169 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.18■□□□□ 0.02
GABRA4P48169 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.18■□□□□ 0.02
GABRA4P48169 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GABRA4P48169 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.18■□□□□ 0.02
GABRA4P48169 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GABRA4P48169 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms