Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SLC6A12P48065 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A12P48065 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC6A12P48065 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SLC6A12P48065 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SLC6A12P48065 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC6A12P48065 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC6A12P48065 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
SLC6A12P48065 AC020658.6-201ENST00000623564 1870 ntBASIC15.49■□□□□ 0.07
SLC6A12P48065 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC6A12P48065 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC6A12P48065 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.49■□□□□ 0.07
SLC6A12P48065 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC6A12P48065 CNN2P11-201ENST00000429351 262 ntBASIC15.49■□□□□ 0.07
SLC6A12P48065 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC6A12P48065 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC6A12P48065 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.49■□□□□ 0.07
SLC6A12P48065 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC6A12P48065 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC6A12P48065 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 AC007967.4-201ENST00000614700 386 ntBASIC15.49■□□□□ 0.07
SLC6A12P48065 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC6A12P48065 CICP13-201ENST00000422015 2789 ntBASIC15.49■□□□□ 0.07
SLC6A12P48065 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC6A12P48065 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SLC6A12P48065 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC6A12P48065 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A12P48065 AC092384.3-202ENST00000564646 2873 ntBASIC15.49■□□□□ 0.07
SLC6A12P48065 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC6A12P48065 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.48■□□□□ 0.07
SLC6A12P48065 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC6A12P48065 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 AC004967.1-201ENST00000453589 447 ntBASIC15.48■□□□□ 0.07
SLC6A12P48065 PHKG1P2-201ENST00000457537 863 ntBASIC15.48■□□□□ 0.07
SLC6A12P48065 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
SLC6A12P48065 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC6A12P48065 AL450472.2-201ENST00000603663 1156 ntBASIC15.48■□□□□ 0.07
SLC6A12P48065 AC027612.4-201ENST00000605371 583 ntBASIC15.48■□□□□ 0.07
SLC6A12P48065 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 AL133215.2-201ENST00000609242 977 ntBASIC15.48■□□□□ 0.07
SLC6A12P48065 AP001059.3-201ENST00000619053 235 ntBASIC15.48■□□□□ 0.07
SLC6A12P48065 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SLC6A12P48065 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A12P48065 AC092850.2-201ENST00000623821 2697 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms