Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC1A1P43005 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC1A1P43005 AC140113.2-201ENST00000604370 208 ntBASIC16.87■□□□□ 0.29
SLC1A1P43005 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC1A1P43005 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC1A1P43005 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC1A1P43005 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC1A1P43005 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC1A1P43005 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLC1A1P43005 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 FOXO1B-201ENST00000504678 1527 ntBASIC16.86■□□□□ 0.29
SLC1A1P43005 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SLC1A1P43005 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SLC1A1P43005 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 TFAMP1-201ENST00000412727 736 ntBASIC16.86■□□□□ 0.29
SLC1A1P43005 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC1A1P43005 AL355306.1-201ENST00000415580 579 ntBASIC16.86■□□□□ 0.29
SLC1A1P43005 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC1A1P43005 AL671277.1-201ENST00000429656 993 ntBASIC16.86■□□□□ 0.29
SLC1A1P43005 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC1A1P43005 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC1A1P43005 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.86■□□□□ 0.29
SLC1A1P43005 AL135744.1-201ENST00000565098 629 ntBASIC16.86■□□□□ 0.29
SLC1A1P43005 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 AC092850.2-201ENST00000623821 2697 ntBASIC16.86■□□□□ 0.29
SLC1A1P43005 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC1A1P43005 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC1A1P43005 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC1A1P43005 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC1A1P43005 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.86■□□□□ 0.29
SLC1A1P43005 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC1A1P43005 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
SLC1A1P43005 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC1A1P43005 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC1A1P43005 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 MST1L-201ENST00000442552 2185 ntBASIC16.85■□□□□ 0.29
SLC1A1P43005 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 CICP13-201ENST00000422015 2789 ntBASIC16.85■□□□□ 0.29
SLC1A1P43005 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC1A1P43005 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC1A1P43005 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC1A1P43005 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC1A1P43005 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC1A1P43005 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC1A1P43005 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC1A1P43005 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.85■□□□□ 0.29
SLC1A1P43005 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC1A1P43005 AC027307.2-201ENST00000591252 911 ntBASIC16.85■□□□□ 0.29
SLC1A1P43005 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC1A1P43005 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
SLC1A1P43005 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC1A1P43005 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC1A1P43005 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms