Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
KDM5CP41229 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM5CP41229 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM5CP41229 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM5CP41229 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM5CP41229 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KDM5CP41229 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM5CP41229 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC23.64■■□□□ 1.37
KDM5CP41229 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KDM5CP41229 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
KDM5CP41229 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC23.64■■□□□ 1.37
KDM5CP41229 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC23.64■■□□□ 1.37
KDM5CP41229 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC23.64■■□□□ 1.37
KDM5CP41229 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC23.64■■□□□ 1.37
KDM5CP41229 MIR4722-201ENST00000578292 60 ntBASIC23.64■■□□□ 1.37
KDM5CP41229 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC23.64■■□□□ 1.37
KDM5CP41229 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC23.64■■□□□ 1.37
KDM5CP41229 AC145423.3-201ENST00000615987 467 ntBASIC23.64■■□□□ 1.37
KDM5CP41229 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
KDM5CP41229 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KDM5CP41229 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KDM5CP41229 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM5CP41229 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KDM5CP41229 FOS-202ENST00000535987 1402 ntTSL 2 BASIC23.63■■□□□ 1.37
KDM5CP41229 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KDM5CP41229 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KDM5CP41229 REXO1L1P-202ENST00000608646 1974 ntBASIC23.63■■□□□ 1.37
KDM5CP41229 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC23.63■■□□□ 1.37
KDM5CP41229 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM5CP41229 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM5CP41229 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
KDM5CP41229 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM5CP41229 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM5CP41229 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC23.63■■□□□ 1.37
KDM5CP41229 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC23.63■■□□□ 1.37
KDM5CP41229 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC23.63■■□□□ 1.37
KDM5CP41229 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC23.63■■□□□ 1.37
KDM5CP41229 MIR4706-201ENST00000582134 82 ntBASIC23.63■■□□□ 1.37
KDM5CP41229 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
KDM5CP41229 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM5CP41229 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM5CP41229 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KDM5CP41229 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM5CP41229 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KDM5CP41229 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM5CP41229 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KDM5CP41229 HCG18-245ENST00000602550 559 ntTSL 4 BASIC23.62■■□□□ 1.37
KDM5CP41229 ECM1P1-201ENST00000604092 1279 ntBASIC23.62■■□□□ 1.37
KDM5CP41229 AC134407.2-201ENST00000625089 1978 ntBASIC23.62■■□□□ 1.37
KDM5CP41229 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
KDM5CP41229 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC23.62■■□□□ 1.37
KDM5CP41229 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM5CP41229 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM5CP41229 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM5CP41229 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
KDM5CP41229 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
KDM5CP41229 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM5CP41229 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM5CP41229 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
KDM5CP41229 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
KDM5CP41229 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
KDM5CP41229 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 TMEM198B-204ENST00000484016 896 ntBASIC23.61■■□□□ 1.37
KDM5CP41229 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC23.61■■□□□ 1.37
KDM5CP41229 KRT18P25-201ENST00000508931 1278 ntBASIC23.61■■□□□ 1.37
KDM5CP41229 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
KDM5CP41229 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC23.61■■□□□ 1.37
KDM5CP41229 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC23.61■■□□□ 1.37
KDM5CP41229 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
KDM5CP41229 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 AP005019.2-201ENST00000615104 511 ntBASIC23.61■■□□□ 1.37
KDM5CP41229 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC23.61■■□□□ 1.37
KDM5CP41229 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 KRT8P35-201ENST00000483942 1338 ntBASIC23.61■■□□□ 1.37
KDM5CP41229 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC23.61■■□□□ 1.37
KDM5CP41229 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
KDM5CP41229 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
KDM5CP41229 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
KDM5CP41229 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC23.61■■□□□ 1.37
KDM5CP41229 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
KDM5CP41229 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
KDM5CP41229 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KDM5CP41229 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
KDM5CP41229 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC23.61■■□□□ 1.37
KDM5CP41229 IMP3P2-201ENST00000489760 475 ntBASIC23.61■■□□□ 1.37
KDM5CP41229 RERG-205ENST00000537647 935 ntTSL 2 BASIC23.61■■□□□ 1.37
KDM5CP41229 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC23.61■■□□□ 1.37
KDM5CP41229 AC097724.1-201ENST00000609581 426 ntBASIC23.61■■□□□ 1.37
KDM5CP41229 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KDM5CP41229 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
KDM5CP41229 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms